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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26312696_26313408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26312696 - 26313408

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATGTATCT

Flanking Amino Acid:

SPKKGGETSPATRQTDASGP

Intron Amino Acid Position:

1148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.7

33.8

Major BPS

75.9

0.64

66.1

40.5

Major PPT

72.6

0.51

1.1

75.8

38.3

Minor 5ss

34.6

-1.7

2.9

Minor BPS

47.3

-0.1

2.3

73.85

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747