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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26315068_26315707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26315068 - 26315707

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTTTCCAATT

Flanking Amino Acid:

PTMATVCVQQLLKTLFGTNL

Intron Amino Acid Position:

1254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

88.4

0.86

0.7

81.1

30.9

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

55.8

0.26

1.8

80.24

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747