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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26316593_26316725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26316593 - 26316725

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCATA

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTACTTTAAAA

Flanking Amino Acid:

SSAAKHRADKNAIHNHIRLF

Intron Amino Acid Position:

1355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

40.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.7

0.8

33.4

Minor 5ss

-0.9

3.1

57.8

46.3

Minor BPS

69.5

0.61

1.4

76.06

34.4

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747