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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26319477_26321443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26319477 - 26321443

Intron Length:

1967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

GGACTTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTCTTTTGGACT

Flanking Amino Acid:

MLLRLIQYHQVLEMFILVLQ

Intron Amino Acid Position:

1523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

71.4

0.53

1.1

63.4

Major PPT

66.4

0.37

0.9

62.3

39.6

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

62.2

0.46

1.4

78.81

37.8

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747