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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26331060_26332257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26331060 - 26332257

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAGTGATAAAAT

Flanking Amino Acid:

NWWSEVHQTPKRHSLSTTKL

Intron Amino Acid Position:

1799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

0.72

78.4

31.2

Major PPT

79.3

0.66

0.9

73.2

37.2

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

43.5

-0.4

2.3

63.53

46.1

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747