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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26336920_26337427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26336920 - 26337427

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TCCGTTATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTTCCGTTATT

Flanking Amino Acid:

PALETVVLDKDWYVSLVRSQ

Intron Amino Acid Position:

2038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

80.6

27.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

67.2

0.39

1.1

37.2

Minor 5ss

43.2

-0.7

3.1

56.6

Minor BPS

61.3

0.44

2.3

87.87

37.8

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747