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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26343905_26345034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26343905 - 26345034

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

AATGTTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATCTCTGAATG

Flanking Amino Acid:

KEFIYRINTLGWISRTQFEE

Intron Amino Acid Position:

2395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

69.4

0.44

0.9

66.9

39.6

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

58.8

0.14

1.5

62.85

38.9

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747