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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26345136_26345826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26345136 - 26345826

Intron Length:

691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCA

5'SS Class:

major

3'SS Sequence:

GTTCATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTTTTTCCAATT

Flanking Amino Acid:

VMDQEESQQEEDTERTQINV

Intron Amino Acid Position:

2429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.2

34.9

Major BPS

77.3

0.68

81.5

Major PPT

82.7

0.74

0.9

37.6

Minor 5ss

37.1

-1.5

3.2

48.4

47.2

Minor BPS

55.8

0.26

1.8

80.24

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747