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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26346752_26347492_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26346752 - 26347492

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTAA

5'SS Class:

major

3'SS Sequence:

TTCATGTTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTTCTTCATG

Flanking Amino Acid:

IGDMDYKLGQVSIHSIWLGN

Intron Amino Acid Position:

2555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

32.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

59.9

0.22

1.2

59.6

45.2

Minor 5ss

-0.9

2.5

49.8

46.5

Minor BPS

66.2

0.36

1.8

74.4

38.6

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747