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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26351351_26351575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26351351 - 26351575

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

GPEFSAGIIQMCGVMVSGSD

Intron Amino Acid Position:

2796

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.8

0.85

0.8

85.9

33.1

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

HTT

Ensembl Gene ID:

ENSAPLG00000007777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008199

26276572 - 26355318

78747