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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26406310_26415750_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26406310 - 26415750

Intron Length:

9441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTATCT

5'SS Class:

major

3'SS Sequence:

ATTCCTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATGAATTTAATT

Flanking Amino Acid:

SSSSLLSYKLRTEERPVKKR

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

37.9

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.5

0.71

0.8

78.4

34.1

Minor 5ss

39.3

-1.2

3.3

57.4

46.8

Minor BPS

58.8

0.35

1.5

71.92

39.3

Associated Gene:

Gene:

MSANTD1

Ensembl Gene ID:

ENSAPLG00000008738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009086

26381625 - 26415991

34367