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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26480403_26483636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26480403 - 26483636

Intron Length:

3234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATGTGCTTAATT

Flanking Amino Acid:

QDPLGVKYFSEFLRKEFSEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

79.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

72.1

0.5

0.8

64.3

37.2

Minor 5ss

43.1

-0.8

3.4

65.3

45.9

Minor BPS

68.9

0.67

1.7

82.03

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028651

26480277 - 26489233

8957

ENSAPLT00000048110

26480283 - 26500246

19964