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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26539214_26540257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26539214 - 26540257

Intron Length:

1044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

AACTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTTAAAC

Flanking Amino Acid:

EEFTGRDCQMRKCFDNSLYE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.1

0.36

62.2

43.5

Minor 5ss

41.6

-0.9

2.8

51.4

39.2

Minor BPS

70.5

0.62

1.3

75.89

33.9

Associated Gene:

Gene:

HGFAC

Ensembl Gene ID:

ENSAPLG00000009213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009616

26525893 - 26565227

39335