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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26541869_26553101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26541869 - 26553101

Intron Length:

11233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TATGCTTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TAGCACTGAATC

Flanking Amino Acid:

RNFVGKYCNIAPFQMCYRGN

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

72.3

0.5

1.1

65.6

45.1

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

49.8

-0

1.6

59.43

39.1

Associated Gene:

Gene:

HGFAC

Ensembl Gene ID:

ENSAPLG00000009213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009616

26525893 - 26565227

39335