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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26555657_26556581_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26555657 - 26556581

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATATCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTCCCTTTATA

Flanking Amino Acid:

SWDYCKIPSCESRERKPPVP

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.4

38.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

75.8

0.58

0.8

74.2

34.8

Minor 5ss

41.3

-1

2.5

48.1

42.7

Minor BPS

71.1

0.66

1.6

81.07

33.9

Associated Gene:

Gene:

HGFAC

Ensembl Gene ID:

ENSAPLG00000009213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009616

26525893 - 26565227

39335