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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26563185_26565056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26563185 - 26565056

Intron Length:

1872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CTTTCCTTACTT

Flanking Amino Acid:

YFDSKSDACQGDSGGPLACE

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

72.3

39.7

Major BPS

90.7

1.01

0.7

19.9

Major PPT

71.6

0.49

66.2

38.1

Minor 5ss

40.4

-1.1

3.3

55.5

48.6

Minor BPS

74.2

0.84

1.6

87.41

38.9

Associated Gene:

Gene:

HGFAC

Ensembl Gene ID:

ENSAPLG00000009213

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009616

26525893 - 26565227

39335