Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_26646111_26647024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26646111 - 26647024

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTCTGAA

5'SS Class:

major

3'SS Sequence:

TATATTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATATTTCAACA

Flanking Amino Acid:

ILLETVSRTEDIHKNVINPS

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

66.3

34.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

74.9

0.56

70.4

39.7

Minor 5ss

38.2

-1.3

3.1

48.5

47.7

Minor BPS

59.1

0.28

1.5

69.26

36.8

Associated Gene:

Gene:

LRPAP1

Ensembl Gene ID:

ENSAPLG00000009747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043072

26643853 - 26652508

8656

ENSAPLT00000010173

26643938 - 26652508

8571