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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26648909_26649243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26648909 - 26649243

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCCCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGGTTTTAATG

Flanking Amino Acid:

KEAKLRRNLNVIMTKYGMNG

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

66.6

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.6

0.51

0.9

66.3

Minor 5ss

37.2

-1.4

3.3

46.9

Minor BPS

53.7

-0

1.5

53.42

Associated Gene:

Gene:

LRPAP1

Ensembl Gene ID:

ENSAPLG00000009747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043072

26643853 - 26652508

8656

ENSAPLT00000010173

26643938 - 26652508

8571