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Intron Name: Anas_platyrhynchos_platyrhynchos_4_26649389_26652328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26649389 - 26652328

Intron Length:

2940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CTGTTCTCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TGTAACTGAAAA

Flanking Amino Acid:

LNQIWEKAQRLHLSAVKLAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

74.9

0.56

0.8

73.7

31.4

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

49.8

-0

1.8

65.07

Associated Gene:

Gene:

LRPAP1

Ensembl Gene ID:

ENSAPLG00000009747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043072

26643853 - 26652508

8656

ENSAPLT00000010173

26643938 - 26652508

8571