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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27067401_27084088_F

Intron Information:

Intron Rank:

124538

Intron Class:

major

Intron Phase:

Intron Coordinates:

27067401 - 27084088

Intron Length:

16688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATTA

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

AGGTTCTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

77.8

33.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

85.3

0.79

0.9

76.9

42.1

Minor 5ss

47.1

-0.3

2.9

65.1

46.1

Minor BPS

67.7

0.55

1.2

68.78

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039085

27066216 - 27084104

17889