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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27160508_27162403_F

Intron Information:

Intron Rank:

125158

Intron Class:

major

Intron Phase:

Intron Coordinates:

27160508 - 27162403

Intron Length:

1896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGAGTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

TGTTCCTGAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

72.1

0.5

64.3

40.7

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

64.3

0.53

1.7

82.07

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047733

27160353 - 27181972

21620