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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27175922_27181021_F

Intron Information:

Intron Rank:

125154

Intron Class:

major

Intron Phase:

Intron Coordinates:

27175922 - 27181021

Intron Length:

5100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTACCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

TTTTTTCTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

66.7

0.42

58.1

38.5

Major PPT

87.4

0.84

0.8

82.4

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

55.9

0.18

1.9

75.11

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018000

27175588 - 27181094

5507