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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27233268_27235839_F

Intron Information:

Intron Rank:

133621

Intron Class:

major

Intron Phase:

Intron Coordinates:

27233268 - 27235839

Intron Length:

2572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.5

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

80.9

36.2

Minor 5ss

34.6

-1.8

2.8

35.2

41.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046549

27232826 - 27249933

17108

ENSAPLT00000034066

27232826 - 27237799

4974