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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27273190_27285594_F

Intron Information:

Intron Rank:

144796

Intron Class:

major

Intron Phase:

Intron Coordinates:

27273190 - 27285594

Intron Length:

12405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TTTTTTTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

86.6

0.82

0.9

86.9

31.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

54.6

-0

1.9

67.62

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044353

27273162 - 27301474

28313