Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_2728589_2730737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2728589 - 2730737

Intron Length:

2149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTTAA

5'SS Class:

major

3'SS Sequence:

ATACTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTGTACAAAATA

Flanking Amino Acid:

SPHYNYSEALTFDSHKGFWC

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

76.3

30.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

76.7

0.6

73.5

41.1

Minor 5ss

35.4

-1.7

2.8

39.2

39.9

Minor BPS

45.3

-0.3

57.99

41.6

Associated Gene:

Gene:

NDST3

Ensembl Gene ID:

ENSAPLG00000014790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015449

2666981 - 2734558

67578