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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27341768_27343592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27341768 - 27343592

Intron Length:

1825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTCTTGTGAATT

Flanking Amino Acid:

VRGIQHDVTTAADGDYWRLL

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

68.7

0.47

0.9

67.9

Major PPT

65.6

0.35

66.4

33.5

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

52.3

0.15

2.1

75.82

41.6

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416