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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27343693_27346697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27343693 - 27346697

Intron Length:

3005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGCTC

5'SS Class:

major

3'SS Sequence:

TTTGCCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TCCCATCTAACT

Flanking Amino Acid:

RDALLNYMEMVHRGIKGIVS

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

62.2

42.2

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

75.8

0.58

69.5

41.6

Minor 5ss

41.5

-0.9

3.3

55.8

43.2

Minor BPS

48.5

-0

1.9

66.85

43.7

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416