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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27351202_27356174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27351202 - 27356174

Intron Length:

4973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

TTTTCCTGGATT

Flanking Amino Acid:

PIPQSYWWGKVAPETKAVMK

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

73.6

0.53

69.3

40.5

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

76.7

0.92

1.3

92.05

30.3

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416