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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27356337_27357345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27356337 - 27357345

Intron Length:

1009

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TATTCCAAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTATACTGAACT

Flanking Amino Acid:

PDGYELAAEEGAGYNGWVIG

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

62.5

0.28

61.8

38.6

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

70.5

0.72

1.6

87.52

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416