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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27359798_27360579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27359798 - 27360579

Intron Length:

782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTTAAAC

Flanking Amino Acid:

GCFDPLAKLRGEVEIEEDLP

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

93.6

0.98

0.6

92.4

17.8

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

69.6

0.59

1.3

74.76

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416