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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27360955_27362206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27360955 - 27362206

Intron Length:

1252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATATGTTTACCT

Flanking Amino Acid:

EPGQCQTVQKAKCVDISLSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

100

1.24

0.5

100

Major PPT

78.9

0.65

0.7

27.1

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

53.8

0.2

74.74

42.3

Associated Gene:

Gene:

CPZ

Ensembl Gene ID:

ENSAPLG00000010071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038626

27340873 - 27374770

33898

ENSAPLT00000010511

27340873 - 27364288

23416