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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27461939_27463181_R

Intron Information:

Intron Rank:

136533

Intron Class:

major

Intron Phase:

Intron Coordinates:

27461939 - 27463181

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

38.7

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

40.9

-1

3.7

64.2

47.3

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033249

27460836 - 27463825

2990

ENSAPLT00000018546

27461814 - 27471016

9203