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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27467680_27468793_R

Intron Information:

Intron Rank:

136535

Intron Class:

major

Intron Phase:

Intron Coordinates:

27467680 - 27468793

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGCATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTTATGTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

77.8

38.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

72.1

0.5

0.9

66.1

34.4

Minor 5ss

32.5

-2

3.1

41.1

45.5

Minor BPS

49.4

0.03

2.1

71.74

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018546

27461814 - 27471016

9203