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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2747942_2754276_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2747942 - 2754276

Intron Length:

6335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

ATCTCAATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTGCTTTAATC

Flanking Amino Acid:

WVLTAAHCFKRYGNNTRNYA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

70.9

0.47

0.9

67.1

37.5

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

76.9

0.82

1.2

81.67

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044997

2745811 - 2758249

12439

ENSAPLT00000039067

2745605 - 2755073

9469