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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27513775_27515089_F

Intron Information:

Intron Rank:

132555

Intron Class:

major

Intron Phase:

Intron Coordinates:

27513775 - 27515089

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

TGAATCATAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

0.4

1.1

66.5

36.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

49.8

0.07

1.7

68.96

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023166

27507960 - 27515247

7288