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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27530442_27530786_R

Intron Information:

Intron Rank:

131217

Intron Class:

major

Intron Phase:

Intron Coordinates:

27530442 - 27530786

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGTAGCTTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.8

0.54

0.9

70.7

40.1

Minor 5ss

-1

2.9

56.9

47.4

Minor BPS

48.1

-0

2.2

70.86

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045013

27530245 - 27534419

4175