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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27530923_27534357_R

Intron Information:

Intron Rank:

131218

Intron Class:

major

Intron Phase:

Intron Coordinates:

27530923 - 27534357

Intron Length:

3435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CAATTGTTATTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.3

31.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.7

0.58

0.9

67.5

Minor 5ss

27.4

-2.6

3.5

37.1

47.5

Minor BPS

-0.4

2.2

51.29

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045013

27530245 - 27534419

4175