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Intron Name: Anas_platyrhynchos_platyrhynchos_4_2754454_2758238_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2754454 - 2758238

Intron Length:

3785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATGGCCT

5'SS Class:

weak_major

3'SS Sequence:

GGTAACTGATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

GTCAAGGTAACT

Flanking Amino Acid:

LLAFYLTFPFLYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.1

54.4

42.2

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

43.4

-0.3

1.7

44.1

46.2

Minor 5ss

42.1

-0.9

3.3

42.6

Minor BPS

40.7

-0.6

2.6

62.23

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044997

2745811 - 2758249

12439