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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27585578_27586735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27585578 - 27586735

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TAGTCTTGAATT

Flanking Amino Acid:

DLLGKVFNMEIFGCFALTEL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

70.8

0.52

70.6

31.6

Major PPT

80.3

0.68

0.8

80.5

31.5

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

0.61

1.4

77.88

38.8

Associated Gene:

Gene:

ACOX3

Ensembl Gene ID:

ENSAPLG00000010626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018286

27581773 - 27614346

32574

ENSAPLT00000011099

27581773 - 27613927

32155