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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27587551_27588194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27587551 - 27588194

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

CACAACTGAACT

Flanking Amino Acid:

CQGLHSFIVQIRDIKTLLPM

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

81.3

0.7

0.8

76.9

30.7

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

49.4

0.04

1.7

64.1

45.3

Associated Gene:

Gene:

ACOX3

Ensembl Gene ID:

ENSAPLG00000010626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018286

27581773 - 27614346

32574

ENSAPLT00000011099

27581773 - 27613927

32155