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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27588284_27599130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27588284 - 27599130

Intron Length:

10847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTATTT

Flanking Amino Acid:

KKIGQNGLDNGFAMFHNVRI

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

38.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

0.43

1.1

62.6

47.3

Minor 5ss

37.4

-1.4

44.5

Minor BPS

59.5

0.38

1.9

82.12

39.2

Associated Gene:

Gene:

ACOX3

Ensembl Gene ID:

ENSAPLG00000010626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018286

27581773 - 27614346

32574

ENSAPLT00000011099

27581773 - 27613927

32155