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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27674933_27675861_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27674933 - 27675861

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

GCATACTTATTG

Flanking Amino Acid:

HEVVPNSPSHRGGIQDGDII

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

41.2

-1

2.5

51.4

45.1

Minor BPS

47.8

-0.3

1.8

49.91

Associated Gene:

Gene:

HTRA3

Ensembl Gene ID:

ENSAPLG00000020579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044899

27674588 - 27698379

23792