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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27677607_27682792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27677607 - 27682792

Intron Length:

5186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTCAATA

Flanking Amino Acid:

LTESLDKQNKDSKKRFIGIR

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.3

0.7

0.9

78.3

39.6

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

70.1

0.63

1.4

77.93

32.6

Associated Gene:

Gene:

HTRA3

Ensembl Gene ID:

ENSAPLG00000020579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044899

27674588 - 27698379

23792