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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27682908_27683558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27682908 - 27683558

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AGCACATTAATT

Flanking Amino Acid:

GNSGGPLVNLDGEVIGINTL

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

72.1

0.5

0.9

66.8

34.3

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

56.7

0.29

1.7

69.37

41.3

Associated Gene:

Gene:

HTRA3

Ensembl Gene ID:

ENSAPLG00000020579

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044899

27674588 - 27698379

23792