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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27732591_27732885_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27732591 - 27732885

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTGTGT

5'SS Class:

weak_major

3'SS Sequence:

TTGTGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

TGGTCCATAAAT

Flanking Amino Acid:

EKEKAVTFYKDRALPLAVEI

Intron Amino Acid Position:

979

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.2

42.2

Major BPS

62.2

0.3

1.1

68.9

Major PPT

78.1

0.63

0.9

74.5

Minor 5ss

-1

3.1

57.2

46.9

Minor BPS

63.2

0.49

1.8

79.52

41.8

Associated Gene:

Gene:

SH3TC1

Ensembl Gene ID:

ENSAPLG00000011482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047633

27730903 - 27812987

82085

ENSAPLT00000031185

27726345 - 27762376

36032

ENSAPLT00000012012

27730903 - 27762376

31474