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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27739253_27740744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27739253 - 27740744

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATAAAT

5'SS Class:

major

3'SS Sequence:

TTTTGATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTATTTTTGATT

Flanking Amino Acid:

EQEFQKTHECEIPCSHSNMV

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

75.3

33.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.83

0.8

81.4

35.2

Minor 5ss

35.4

-1.7

3.1

46.5

42.9

Minor BPS

71.1

0.75

1.1

82.58

32.6

Associated Gene:

Gene:

SH3TC1

Ensembl Gene ID:

ENSAPLG00000011482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031185

27726345 - 27762376

36032

ENSAPLT00000012012

27730903 - 27762376

31474

ENSAPLT00000047633

27730903 - 27812987

82085