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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27743888_27744716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27743888 - 27744716

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAGGTACC

5'SS Class:

major

3'SS Sequence:

TTTCTACTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTCTACTTAAAG

Flanking Amino Acid:

ISLEPLIPFHQWFLKVYSDP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.1

63.8

40.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

75.5

0.57

75.7

32.2

Minor 5ss

37.8

-1.4

51.9

38.7

Minor BPS

64.9

0.33

1.7

69.83

Associated Gene:

Gene:

SH3TC1

Ensembl Gene ID:

ENSAPLG00000011482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031185

27726345 - 27762376

36032

ENSAPLT00000012012

27730903 - 27762376

31474

ENSAPLT00000047633

27730903 - 27812987

82085