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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27745742_27747532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27745742 - 27747532

Intron Length:

1791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGCTC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

CTGCAAAGAAAA

Flanking Amino Acid:

IWKFLTYHSLGFINHCMENL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

61.1

43.7

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

84.5

0.78

0.6

81.4

23.6

Minor 5ss

34.2

-1.8

3.5

Minor BPS

35.5

-1.1

1.8

42.81

37.3

Associated Gene:

Gene:

SH3TC1

Ensembl Gene ID:

ENSAPLG00000011482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047633

27730903 - 27812987

82085

ENSAPLT00000031185

27726345 - 27762376

36032