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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27753329_27754933_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27753329 - 27754933

Intron Length:

1605

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCATAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

ATGCACTTAACT

Flanking Amino Acid:

DKTDMLQERMDYPQNGKYTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

41.8

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

71.6

0.49

0.9

67.7

37.6

Minor 5ss

34.2

-1.8

3.2

41.7

44.2

Minor BPS

69.3

0.68

1.5

81.38

39.6

Associated Gene:

Gene:

SH3TC1

Ensembl Gene ID:

ENSAPLG00000011482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047633

27730903 - 27812987

82085

ENSAPLT00000031185

27726345 - 27762376

36032