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Intron Name: Anas_platyrhynchos_platyrhynchos_4_27841815_27857342_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
27841815 - 27857342

Intron Length:
15528

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAAGA

5'SS Class:
strong_major

3'SS Sequence:
TTTTCCCAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTCAA

U12 Branch Point Sequence:
TTTTCCCAAACA

Flanking Amino Acid:
EKYITGRVLEAGEKHYHPTC

Intron Amino Acid Position:
326

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.4
0.98
0.8
80.8
33.7

Major BPS
77.9
0.69
0.8
77.9
25.8

Major PPT
74.9
0.56
0.9
71.1
33.6

Minor 5ss
32.8
-2
2.9
40.7
45.1

Minor BPS
66.4
0.51
2
84.22
35.9

Associated Gene:

Gene:
ABLIM2

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

27774004 - 27910844
136841

27774004 - 27910844
136841

27774004 - 27910844
136841

27774004 - 27910844
136841